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- # Copyright (c) 2022 PaddlePaddle Authors. All Rights Reserved.
- #
- # Licensed under the Apache License, Version 2.0 (the "License");
- # you may not use this file except in compliance with the License.
- # You may obtain a copy of the License at
- #
- # http://www.apache.org/licenses/LICENSE-2.0
- #
- # Unless required by applicable law or agreed to in writing, software
- # distributed under the License is distributed on an "AS IS" BASIS,
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- # See the License for the specific language governing permissions and
- # limitations under the License.
- import numpy as np
- import paddle
- from paddle import _C_ops, in_dynamic_mode
- from paddle.base.data_feeder import convert_dtype
- from paddle.base.framework import (
- _current_expected_place,
- _get_paddle_place,
- core,
- dygraph_only,
- )
- from paddle.base.layer_helper import LayerHelper
- from paddle.tensor import max, to_tensor
- __all__ = [
- 'sparse_coo_tensor',
- 'sparse_csr_tensor',
- ]
- def _handle_dtype(data, dtype):
- if dtype:
- if convert_dtype(dtype) != convert_dtype(data.dtype):
- return data.astype(convert_dtype(dtype))
- return data
- def _infer_dense_shape(indices, values):
- assert len(indices.shape) == 2
- lens = max(indices, axis=1)
- lens = lens + 1
- lens = lens.numpy()
- if len(values.shape) > 1:
- lens = np.append(lens, values.shape[1:])
- return list(lens)
- def _get_place(place):
- place = _get_paddle_place(place)
- if place is None:
- place = _current_expected_place()
- elif not isinstance(
- place, (core.Place, core.CPUPlace, core.CUDAPinnedPlace, core.CUDAPlace)
- ):
- raise ValueError(
- "'place' must be any of paddle.Place, paddle.CPUPlace, paddle.CUDAPinnedPlace, paddle.CUDAPlace"
- )
- return place
- def _check_indices_dtype(dtype):
- if dtype not in [paddle.int8, paddle.int16, paddle.int32, paddle.int64]:
- raise TypeError(
- "the dtype of indices must be 'int8' or 'int16' or 'int32' or 'int64'"
- )
- def sparse_coo_tensor(
- indices, values, shape=None, dtype=None, place=None, stop_gradient=True
- ):
- r"""
- Constructs a sparse ``paddle.Tensor`` in coordinate format according to the indices
- and values of the specified non-zero elements.
- Args:
- indices(list|tuple|ndarray|Tensor): the indices of non-zero elements.
- Can be a list, tuple, numpy\.ndarray, paddle\.Tensor. The indices must be 2-D.
- values(list|tuple|ndarray|Tensor): Initial values for the tensor.
- Can be a scalar, list, tuple, numpy\.ndarray, paddle\.Tensor.
- shape(list|tuple, optional): The shape of the sparse tensor also represents the shape of
- original dense tensor. If not provided the smallest shape will be inferred to
- hold all elements.
- dtype(str|np.dtype, optional): The desired data type of returned tensor. Can be 'bool' , 'float16' ,
- 'float32' , 'float64' , 'int8' , 'int16' , 'int32' , 'int64' , 'uint8',
- 'complex64' , 'complex128'. Default: None, infers dtype from ``data``
- except for python float number which gets dtype from ``get_default_type`` .
- place(CPUPlace|CUDAPinnedPlace|CUDAPlace|str, optional): The place to allocate Tensor. Can be
- CPUPlace, CUDAPinnedPlace, CUDAPlace. Default: None, means global place. If ``place`` is
- string, It can be ``cpu``, ``gpu:x`` and ``gpu_pinned``, where ``x`` is the index of the GPUs.
- stop_gradient(bool, optional): Whether to block the gradient propagation of Autograd. Default: True.
- Returns:
- Tensor: A Tensor constructed from ``indices`` and ``values`` .
- Examples:
- .. code-block:: python
- >>> import paddle
- >>> indices = [[0, 1, 2], [1, 2, 0]]
- >>> values = [1.0, 2.0, 3.0]
- >>> dense_shape = [3, 3]
- >>> coo = paddle.sparse.sparse_coo_tensor(indices, values, dense_shape)
- >>> print(coo)
- Tensor(shape=[3, 3], dtype=paddle.float32, place=Place(cpu), stop_gradient=True,
- indices=[[0, 1, 2],
- [1, 2, 0]],
- values=[1., 2., 3.])
- """
- if in_dynamic_mode():
- place = _get_place(place)
- if not isinstance(indices, core.eager.Tensor):
- indices = to_tensor(
- indices, dtype=None, place=place, stop_gradient=True
- )
- if not isinstance(values, core.eager.Tensor):
- values = to_tensor(values, dtype, place, stop_gradient)
- if len(indices.shape) != 2:
- raise ValueError("'indices' must be 2-D.")
- nnz = indices.shape[1]
- sparse_dim = indices.shape[0]
- _check_indices_dtype(indices.dtype)
- if nnz != values.shape[0]:
- raise ValueError(
- f"the indices and values must have same number of non-zero, but get {nnz} and {values.shape[0]}"
- )
- dense_dim = len(values.shape) - 1
- if not indices.place._equals(place):
- indices = indices._copy_to(place, False)
- if not values.place._equals(place):
- values = values._copy_to(place, False)
- values = _handle_dtype(values, dtype)
- values.stop_gradient = stop_gradient
- min_shape = _infer_dense_shape(indices, values)
- if shape is None:
- shape = min_shape
- else:
- shape = list(shape)
- if shape < min_shape:
- raise ValueError(
- f"the minimum shape required is {min_shape}, but get {shape}"
- )
- if len(shape) != sparse_dim + dense_dim:
- raise ValueError(
- f"the number of dimensions(len(shape) must be sparse_dim({sparse_dim}) + dense_dim({dense_dim}), but get {len(shape)}"
- )
- return _C_ops.sparse_sparse_coo_tensor(values, indices, shape)
- else:
- op_type = 'sparse_sparse_coo_tensor'
- inputs = {'values': values, 'indices': indices}
- if shape[0] is None:
- shape[0] = -1
- attrs = {'shape': shape}
- helper = LayerHelper(op_type)
- out = helper.create_sparse_variable_for_type_inference(dtype)
- helper.append_op(
- type=op_type, inputs=inputs, outputs={'out': out}, attrs=attrs
- )
- return out
- # TODO: need to support shape is None
- @dygraph_only
- def sparse_csr_tensor(
- crows, cols, values, shape, dtype=None, place=None, stop_gradient=True
- ):
- r"""
- Constructs a sparse ``paddle.Tensor`` in CSR(Compressed Sparse Row) format according to the
- ``crows``, ``cols`` and ``values``.
- Currently, the crows and cols of each batch must be incremented.
- Args:
- crows(list|tuple|ndarray|Tensor): 1-D array, each element in the rows represents the
- starting position of the first non-zero element of each row in values.
- Can be a list, tuple, numpy\.ndarray, paddle\.Tensor.
- cols(list|tuple|ndarray|Tensor): 1-D array, the column of non-zero elements.
- Can be a list, tuple, numpy\.ndarray, paddle\.Tensor.
- values(list|tuple|ndarray|Tensor): 1-D array, the non-zero elements.
- Can be a scalar, list, tuple, numpy\.ndarray, paddle\.Tensor.
- shape(list|tuple, optional): The shape of the sparse tensor also represents the shape of
- original dense tensor.
- hold all elements.
- dtype(str|np.dtype, optional): The desired data type of returned tensor. Can be 'bool' , 'float16' ,
- 'float32' , 'float64' , 'int8' , 'int16' , 'int32' , 'int64' , 'uint8',
- 'complex64' , 'complex128'. Default: None, infers dtype from ``data``
- except for python float number which gets dtype from ``get_default_type`` .
- place(CPUPlace|CUDAPinnedPlace|CUDAPlace|str, optional): The place to allocate Tensor. Can be
- CPUPlace, CUDAPinnedPlace, CUDAPlace. Default: None, means global place. If ``place`` is
- string, It can be ``cpu``, ``gpu:x`` and ``gpu_pinned``, where ``x`` is the index of the GPUs.
- stop_gradient(bool, optional): Whether to block the gradient propagation of Autograd. Default: True.
- Returns:
- Tensor: A Tensor constructed from ``crows``, ``cols`` and ``values`` .
- Examples:
- .. code-block:: python
- >>> import paddle
- >>> crows = [0, 2, 3, 5]
- >>> cols = [1, 3, 2, 0, 1]
- >>> values = [1, 2, 3, 4, 5]
- >>> dense_shape = [3, 4]
- >>> csr = paddle.sparse.sparse_csr_tensor(crows, cols, values, dense_shape)
- >>> print(csr)
- Tensor(shape=[3, 4], dtype=paddle.int64, place=Place(cpu), stop_gradient=True,
- crows=[0, 2, 3, 5],
- cols=[1, 3, 2, 0, 1],
- values=[1, 2, 3, 4, 5])
- """
- place = _get_place(place)
- if not isinstance(crows, core.eager.Tensor):
- crows = to_tensor(crows, dtype=None, place=place, stop_gradient=True)
- if not isinstance(cols, core.eager.Tensor):
- cols = to_tensor(cols, dtype=None, place=place, stop_gradient=True)
- if not isinstance(values, core.eager.Tensor):
- values = to_tensor(values, dtype, place, stop_gradient)
- _check_indices_dtype(crows.dtype)
- _check_indices_dtype(cols.dtype)
- if len(shape) != 2 and len(shape) != 3:
- raise ValueError(
- f"SparseCsrTensor only support 2-D or 3-D matrix. but get shape {shape}"
- )
- rows = shape[len(shape) - 2]
- if not crows.place._equals(place):
- crows = crows._copy_to(place, False)
- if not cols.place._equals(place):
- cols = cols._copy_to(place, False)
- if not values.place._equals(place):
- values = values._copy_to(place, False)
- values = _handle_dtype(values, dtype)
- values.stop_gradient = stop_gradient
- if len(crows.shape) != 1 or len(cols.shape) != 1 or len(values.shape) != 1:
- raise ValueError("The 'crows', 'cols' and 'values' must be 1-D.")
- if len(cols) != len(values):
- raise ValueError("the length of cols must be same as length of values")
- if len(shape) == 2:
- if crows.shape[0] != rows + 1:
- raise ValueError(
- f"The length({crows.shape[0]}) of crows must be equal to the rows({rows})+1 of matrix."
- )
- if crows[0] != 0:
- raise ValueError("the 0th value of crows must be 0")
- if crows[-1] != values.shape[0]:
- raise ValueError(
- "the last value of crows must be equal the number of non-zero"
- )
- else:
- if crows.shape[0] % (rows + 1) != 0:
- raise ValueError(
- f"The length({crows.shape[0]}) of crows must be divisible the rows({rows})+1 of matrix."
- )
- # TODO(zkh2016): check whether the value in crows and cols is legal
- return core.eager.sparse_csr_tensor(
- crows, cols, values, shape, stop_gradient
- )
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