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- import numpy as np
- import pytest
- import pandas as pd
- from pandas import (
- DataFrame,
- Index,
- MultiIndex,
- Series,
- Timestamp,
- date_range,
- )
- import pandas._testing as tm
- def test_apply_describe_bug(multiindex_dataframe_random_data):
- grouped = multiindex_dataframe_random_data.groupby(level="first")
- grouped.describe() # it works!
- def test_series_describe_multikey():
- ts = Series(
- np.arange(10, dtype=np.float64), index=date_range("2020-01-01", periods=10)
- )
- grouped = ts.groupby([lambda x: x.year, lambda x: x.month])
- result = grouped.describe()
- tm.assert_series_equal(result["mean"], grouped.mean(), check_names=False)
- tm.assert_series_equal(result["std"], grouped.std(), check_names=False)
- tm.assert_series_equal(result["min"], grouped.min(), check_names=False)
- def test_series_describe_single():
- ts = Series(
- np.arange(10, dtype=np.float64), index=date_range("2020-01-01", periods=10)
- )
- grouped = ts.groupby(lambda x: x.month)
- result = grouped.apply(lambda x: x.describe())
- expected = grouped.describe().stack(future_stack=True)
- tm.assert_series_equal(result, expected)
- @pytest.mark.parametrize("keys", ["key1", ["key1", "key2"]])
- def test_series_describe_as_index(as_index, keys):
- # GH#49256
- df = DataFrame(
- {
- "key1": ["one", "two", "two", "three", "two"],
- "key2": ["one", "two", "two", "three", "two"],
- "foo2": [1, 2, 4, 4, 6],
- }
- )
- gb = df.groupby(keys, as_index=as_index)["foo2"]
- result = gb.describe()
- expected = DataFrame(
- {
- "key1": ["one", "three", "two"],
- "count": [1.0, 1.0, 3.0],
- "mean": [1.0, 4.0, 4.0],
- "std": [np.nan, np.nan, 2.0],
- "min": [1.0, 4.0, 2.0],
- "25%": [1.0, 4.0, 3.0],
- "50%": [1.0, 4.0, 4.0],
- "75%": [1.0, 4.0, 5.0],
- "max": [1.0, 4.0, 6.0],
- }
- )
- if len(keys) == 2:
- expected.insert(1, "key2", expected["key1"])
- if as_index:
- expected = expected.set_index(keys)
- tm.assert_frame_equal(result, expected)
- def test_frame_describe_multikey(tsframe, using_infer_string):
- grouped = tsframe.groupby([lambda x: x.year, lambda x: x.month])
- result = grouped.describe()
- desc_groups = []
- for col in tsframe:
- group = grouped[col].describe()
- # GH 17464 - Remove duplicate MultiIndex levels
- group_col = MultiIndex(
- levels=[Index([col], dtype=tsframe.columns.dtype), group.columns],
- codes=[[0] * len(group.columns), range(len(group.columns))],
- )
- group = DataFrame(group.values, columns=group_col, index=group.index)
- desc_groups.append(group)
- expected = pd.concat(desc_groups, axis=1)
- tm.assert_frame_equal(result, expected)
- # remainder of the tests fails with string dtype but is testing deprecated behaviour
- if using_infer_string:
- return
- msg = "DataFrame.groupby with axis=1 is deprecated"
- with tm.assert_produces_warning(FutureWarning, match=msg):
- groupedT = tsframe.groupby({"A": 0, "B": 0, "C": 1, "D": 1}, axis=1)
- result = groupedT.describe()
- expected = tsframe.describe().T
- # reverting the change from https://github.com/pandas-dev/pandas/pull/35441/
- expected.index = MultiIndex(
- levels=[[0, 1], expected.index],
- codes=[[0, 0, 1, 1], range(len(expected.index))],
- )
- tm.assert_frame_equal(result, expected)
- def test_frame_describe_tupleindex():
- # GH 14848 - regression from 0.19.0 to 0.19.1
- df1 = DataFrame(
- {
- "x": [1, 2, 3, 4, 5] * 3,
- "y": [10, 20, 30, 40, 50] * 3,
- "z": [100, 200, 300, 400, 500] * 3,
- }
- )
- df1["k"] = [(0, 0, 1), (0, 1, 0), (1, 0, 0)] * 5
- df2 = df1.rename(columns={"k": "key"})
- msg = "Names should be list-like for a MultiIndex"
- with pytest.raises(ValueError, match=msg):
- df1.groupby("k").describe()
- with pytest.raises(ValueError, match=msg):
- df2.groupby("key").describe()
- def test_frame_describe_unstacked_format():
- # GH 4792
- prices = {
- Timestamp("2011-01-06 10:59:05", tz=None): 24990,
- Timestamp("2011-01-06 12:43:33", tz=None): 25499,
- Timestamp("2011-01-06 12:54:09", tz=None): 25499,
- }
- volumes = {
- Timestamp("2011-01-06 10:59:05", tz=None): 1500000000,
- Timestamp("2011-01-06 12:43:33", tz=None): 5000000000,
- Timestamp("2011-01-06 12:54:09", tz=None): 100000000,
- }
- df = DataFrame({"PRICE": prices, "VOLUME": volumes})
- result = df.groupby("PRICE").VOLUME.describe()
- data = [
- df[df.PRICE == 24990].VOLUME.describe().values.tolist(),
- df[df.PRICE == 25499].VOLUME.describe().values.tolist(),
- ]
- expected = DataFrame(
- data,
- index=Index([24990, 25499], name="PRICE"),
- columns=["count", "mean", "std", "min", "25%", "50%", "75%", "max"],
- )
- tm.assert_frame_equal(result, expected)
- @pytest.mark.filterwarnings(
- "ignore:"
- "indexing past lexsort depth may impact performance:"
- "pandas.errors.PerformanceWarning"
- )
- @pytest.mark.parametrize("as_index", [True, False])
- @pytest.mark.parametrize("keys", [["a1"], ["a1", "a2"]])
- def test_describe_with_duplicate_output_column_names(as_index, keys):
- # GH 35314
- df = DataFrame(
- {
- "a1": [99, 99, 99, 88, 88, 88],
- "a2": [99, 99, 99, 88, 88, 88],
- "b": [1, 2, 3, 4, 5, 6],
- "c": [10, 20, 30, 40, 50, 60],
- },
- columns=["a1", "a2", "b", "b"],
- copy=False,
- )
- if keys == ["a1"]:
- df = df.drop(columns="a2")
- expected = (
- DataFrame.from_records(
- [
- ("b", "count", 3.0, 3.0),
- ("b", "mean", 5.0, 2.0),
- ("b", "std", 1.0, 1.0),
- ("b", "min", 4.0, 1.0),
- ("b", "25%", 4.5, 1.5),
- ("b", "50%", 5.0, 2.0),
- ("b", "75%", 5.5, 2.5),
- ("b", "max", 6.0, 3.0),
- ("b", "count", 3.0, 3.0),
- ("b", "mean", 5.0, 2.0),
- ("b", "std", 1.0, 1.0),
- ("b", "min", 4.0, 1.0),
- ("b", "25%", 4.5, 1.5),
- ("b", "50%", 5.0, 2.0),
- ("b", "75%", 5.5, 2.5),
- ("b", "max", 6.0, 3.0),
- ],
- )
- .set_index([0, 1])
- .T
- )
- expected.columns.names = [None, None]
- if len(keys) == 2:
- expected.index = MultiIndex(
- levels=[[88, 99], [88, 99]], codes=[[0, 1], [0, 1]], names=["a1", "a2"]
- )
- else:
- expected.index = Index([88, 99], name="a1")
- if not as_index:
- expected = expected.reset_index()
- result = df.groupby(keys, as_index=as_index).describe()
- tm.assert_frame_equal(result, expected)
- def test_describe_duplicate_columns():
- # GH#50806
- df = DataFrame([[0, 1, 2, 3]])
- df.columns = [0, 1, 2, 0]
- gb = df.groupby(df[1])
- result = gb.describe(percentiles=[])
- columns = ["count", "mean", "std", "min", "50%", "max"]
- frames = [
- DataFrame([[1.0, val, np.nan, val, val, val]], index=[1], columns=columns)
- for val in (0.0, 2.0, 3.0)
- ]
- expected = pd.concat(frames, axis=1)
- expected.columns = MultiIndex(
- levels=[[0, 2], columns],
- codes=[6 * [0] + 6 * [1] + 6 * [0], 3 * list(range(6))],
- )
- expected.index.names = [1]
- tm.assert_frame_equal(result, expected)
- class TestGroupByNonCythonPaths:
- # GH#5610 non-cython calls should not include the grouper
- # Tests for code not expected to go through cython paths.
- @pytest.fixture
- def df(self):
- df = DataFrame(
- [[1, 2, "foo"], [1, np.nan, "bar"], [3, np.nan, "baz"]],
- columns=["A", "B", "C"],
- )
- return df
- @pytest.fixture
- def gb(self, df):
- gb = df.groupby("A")
- return gb
- @pytest.fixture
- def gni(self, df):
- gni = df.groupby("A", as_index=False)
- return gni
- def test_describe(self, df, gb, gni):
- # describe
- expected_index = Index([1, 3], name="A")
- expected_col = MultiIndex(
- levels=[["B"], ["count", "mean", "std", "min", "25%", "50%", "75%", "max"]],
- codes=[[0] * 8, list(range(8))],
- )
- expected = DataFrame(
- [
- [1.0, 2.0, np.nan, 2.0, 2.0, 2.0, 2.0, 2.0],
- [0.0, np.nan, np.nan, np.nan, np.nan, np.nan, np.nan, np.nan],
- ],
- index=expected_index,
- columns=expected_col,
- )
- result = gb.describe()
- tm.assert_frame_equal(result, expected)
- expected = expected.reset_index()
- result = gni.describe()
- tm.assert_frame_equal(result, expected)
- @pytest.mark.parametrize("dtype", [int, float, object])
- @pytest.mark.parametrize(
- "kwargs",
- [
- {"percentiles": [0.10, 0.20, 0.30], "include": "all", "exclude": None},
- {"percentiles": [0.10, 0.20, 0.30], "include": None, "exclude": ["int"]},
- {"percentiles": [0.10, 0.20, 0.30], "include": ["int"], "exclude": None},
- ],
- )
- def test_groupby_empty_dataset(dtype, kwargs):
- # GH#41575
- df = DataFrame([[1, 2, 3]], columns=["A", "B", "C"], dtype=dtype)
- df["B"] = df["B"].astype(int)
- df["C"] = df["C"].astype(float)
- result = df.iloc[:0].groupby("A").describe(**kwargs)
- expected = df.groupby("A").describe(**kwargs).reset_index(drop=True).iloc[:0]
- tm.assert_frame_equal(result, expected)
- result = df.iloc[:0].groupby("A").B.describe(**kwargs)
- expected = df.groupby("A").B.describe(**kwargs).reset_index(drop=True).iloc[:0]
- expected.index = Index([], dtype=df.columns.dtype)
- tm.assert_frame_equal(result, expected)
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